- Solution 1. for "Ubuntu 20.04.4 LTS”:
- Solution 1. for "Ubuntu 20.04.4 LTS”
- Solution 2: Try pip install
- Solution 3: Try conda install
- Original Problem was:
- Attempts that didn’t work
Solution 1. for "Ubuntu 20.04.4 LTS”
:
sudo apt-get install graphviz
np@np-INTEL:~$ python3
Python 3.8.13 (default, Mar 28 2022, 11:38:47)
[GCC 7.5.0] :: Anaconda, Inc. on linux
Type "help", "copyright", "credits" or "license" for more information.
>>> import k2
>>> s = '''
... 0 1 -1 0.1
... 1
... '''
>>> fsa = k2.Fsa.from_str(s)
>>> fsa.draw('hello.svg', title='hello')
<graphviz.graphs.Digraph object at 0x7f4cc026ec10>
>>> exit()
Success! output hello.svg
below
Solution 1. for "Ubuntu 20.04.4 LTS”
sudo apt-get install graphviz
Solution 2: Try pip
install
python -m pip install graphviz
Solution 3: Try conda
install
Can take a very long time.
conda install -c anaconda graphviz
Output during installation:
np@np-INTEL:~$ sudo apt-get install graphviz
[sudo] password for np:
Reading package lists... Done
Building dependency tree
Reading state information... Done
The following packages were automatically installed and are no longer required:
g++-8 javascript-common libaccinj64-10.1 libatomic1:i386 libbsd0:i386 libcublas10 libcublaslt10 libcudart10.1 libcufft10 libcufftw10 libcuinj64-10.1 libcupti-dev
libcupti-doc libcupti10.1 libcurand10 libcusolver10 libcusolvermg10 libcusparse10 libdrm-amdgpu1:i386 libdrm-intel1:i386 libdrm-nouveau2:i386 libdrm-radeon1:i386
libdrm2:i386 libedit2:i386 libegl-dev libegl-mesa0:i386 libegl1:i386 libelf1:i386 libexpat1:i386 libffi7:i386 libgbm1:i386 libgl-dev libgl1:i386 libgl1-mesa-dev
libgl1-mesa-dri:i386 libglapi-mesa:i386 libgles-dev libgles1 libgles2:i386 libglvnd-dev libglvnd0:i386 libglx-dev libglx-mesa0:i386 libglx0:i386 libjs-jquery
libjs-underscore libllvm12:i386 libncurses5 libnppc10 libnppial10 libnppicc10 libnppicom10 libnppidei10 libnppif10 libnppig10 libnppim10 libnppist10 libnppisu10
libnppitc10 libnpps10 libnvblas10 libnvgraph10 libnvidia-cfg1-510 libnvidia-common-470 libnvidia-common-510 libnvidia-compute-510:i386 libnvidia-decode-510
libnvidia-decode-510:i386 libnvidia-encode-510 libnvidia-encode-510:i386 libnvidia-extra-510 libnvidia-fbc1-510 libnvidia-fbc1-510:i386 libnvidia-gl-510
libnvidia-gl-510:i386 libnvidia-ml-dev libnvjpeg10 libnvrtc10.1 libnvtoolsext1 libnvvm3 libopengl-dev libopengl0:i386 libpciaccess0:i386 libpthread-stubs0-dev
libsensors5:i386 libstdc++-8-dev libstdc++6:i386 libthrust-dev libvdpau-dev libvulkan1:i386 libwayland-client0:i386 libwayland-server0:i386 libx11-6:i386 libx11-dev
libx11-xcb1:i386 libxau-dev libxau6:i386 libxcb-dri2-0:i386 libxcb-dri3-0:i386 libxcb-glx0:i386 libxcb-present0:i386 libxcb-randr0:i386 libxcb-shm0:i386
libxcb-sync1:i386 libxcb-xfixes0:i386 libxcb1:i386 libxcb1-dev libxdmcp-dev libxdmcp6:i386 libxext6:i386 libxfixes3:i386 libxshmfence1:i386 libxxf86vm1:i386
mesa-vulkan-drivers:i386 node-html5shiv nsight-compute nsight-systems nvidia-compute-utils-510 nvidia-cuda-dev nvidia-cuda-doc nvidia-cuda-gdb nvidia-dkms-510
nvidia-kernel-common-510 nvidia-opencl-dev nvidia-prime nvidia-profiler nvidia-settings nvidia-visual-profiler ocl-icd-opencl-dev opencl-c-headers
screen-resolution-extra x11proto-core-dev x11proto-dev xorg-sgml-doctools xserver-xorg-video-nvidia-510 xtrans-dev
Use 'sudo apt autoremove' to remove them.
The following additional packages will be installed:
libann0 libcdt5 libcgraph6 libgts-0.7-5 libgts-bin libgvc6 libgvpr2 liblab-gamut1 libpathplan4
Suggested packages:
gsfonts graphviz-doc
The following NEW packages will be installed:
graphviz libann0 libcdt5 libcgraph6 libgts-0.7-5 libgts-bin libgvc6 libgvpr2 liblab-gamut1 libpathplan4
0 upgraded, 10 newly installed, 0 to remove and 64 not upgraded.
Need to get 1,880 kB of archives.
After this operation, 9,205 kB of additional disk space will be used.
Do you want to continue? [Y/n] y
0% [Connecting to banjo.canonical.com (91.189.91.38)]
0% [Connecting to banjo.canonical.com (91.189.91.38)]
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Get:4 http://us.archive.ubuntu.com/ubuntu focal/universe amd64 libgts-0.7-5 amd64 0.7.6+darcs121130-4 [150 kB]
Get:5 http://us.archive.ubuntu.com/ubuntu focal/universe amd64 libpathplan4 amd64 2.42.2-3build2 [21.9 kB]
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Get:9 http://us.archive.ubuntu.com/ubuntu focal/universe amd64 graphviz amd64 2.42.2-3build2 [590 kB]
Get:10 http://us.archive.ubuntu.com/ubuntu focal/universe amd64 libgts-bin amd64 0.7.6+darcs121130-4 [41.3 kB]
Fetched 1,880 kB in 4s (475 kB/s)
Selecting previously unselected package libann0.
(Reading database ... 280796 files and directories currently installed.)
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Unpacking libgts-bin (0.7.6+darcs121130-4) ...
Setting up liblab-gamut1:amd64 (2.42.2-3build2) ...
Setting up libgts-0.7-5:amd64 (0.7.6+darcs121130-4) ...
Setting up libpathplan4:amd64 (2.42.2-3build2) ...
Setting up libann0 (1.1.2+doc-7build1) ...
Setting up libcdt5:amd64 (2.42.2-3build2) ...
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Setting up graphviz (2.42.2-3build2) ...
Processing triggers for man-db (2.9.1-1) ...
Processing triggers for libc-bin (2.31-0ubuntu9.7) ...
np@np-INTEL:~$ which dot
/usr/bin/dot
Original Problem was:
After successfully downloading k2 https://k2-fsa.github.io/k2/installation/conda.html, I tried to use the graphviz
package. Got ModuleNotFoundError: No module named 'graphviz'
np@np-INTEL:~$ python3
Python 3.8.13 (default, Mar 28 2022, 11:38:47)
[GCC 7.5.0] :: Anaconda, Inc. on linux
Type "help", "copyright", "credits" or "license" for more information.
>>> import k2
>>> s = '''
... 0 1 -1 0.1
... 1
... '''
>>> fsa = k2.Fsa.from_str(s)
>>> fsa.draw('hello.svg', title='hello')
You cannot use `to_dot` unless the graphviz package is installed.
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/home/np/anaconda3/lib/python3.8/site-packages/k2/fsa.py", line 352, in draw
digraph = k2.utils.to_dot(self, title=title)
File "/home/np/anaconda3/lib/python3.8/site-packages/k2/utils.py", line 126, in to_dot
import graphviz
ModuleNotFoundError: No module named 'graphviz'
>>> exit()
np@np-INTEL:~$
Attempts that didn’t work
Didn’t work: https://k2-fsa.github.io/k2/installation/conda.html
conda install -c anaconda graphviz
partial output that shows that it was installed but actually: “ModuleNotFoundError: No module named 'graphviz'”
- yaml -> libgcc-ng[version='>=7.3.0'] -> __glibc[version='>=2.17']
- yarl -> libgcc-ng[version='>=7.5.0'] -> __glibc[version='>=2.17']
- zeromq -> libgcc-ng[version='>=7.3.0'] -> __glibc[version='>=2.17']
- zfp -> libgcc-ng[version='>=7.5.0'] -> __glibc[version='>=2.17']
- zlib -> libgcc-ng[version='>=7.5.0'] -> __glibc[version='>=2.17']
- zope.interface -> libgcc-ng[version='>=7.5.0'] -> __glibc[version='>=2.17']
- zstd -> libgcc-ng[version='>=7.5.0'] -> __glibc[version='>=2.17']
Your installed version is: 2.31
np@np-INTEL:~$
np@np-INTEL:~$ python3
Python 3.8.13 (default, Mar 28 2022, 11:38:47)
[GCC 7.5.0] :: Anaconda, Inc. on linux
Type "help", "copyright", "credits" or "license" for more information.
>>> import k2
>>> s = '''
... 0 1 -1 0.1
... 1
... '''
>>> fsa = k2.Fsa.from_str(s)
>>> fsa.draw('hello.svg', title='hello')
You cannot use `to_dot` unless the graphviz package is installed.
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/home/np/anaconda3/lib/python3.8/site-packages/k2/fsa.py", line 352, in draw
digraph = k2.utils.to_dot(self, title=title)
File "/home/np/anaconda3/lib/python3.8/site-packages/k2/utils.py", line 126, in to_dot
import graphviz
ModuleNotFoundError: No module named 'graphviz'
>>> exit()
np@np-INTEL:~$ python
also didn’t work
np@np-INTEL:~$ conda install graphviz=2.50.0 -c pkgs/main
pip installation also didn’t work, couldn’t locate dot package
np@np-INTEL:~$ python -m pip install graphviz
Collecting graphviz
Downloading graphviz-0.20-py3-none-any.whl (46 kB)
━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 47.0/47.0 kB 1.1 MB/s eta 0:00:00
Installing collected packages: graphviz
Successfully installed graphviz-0.20
np@np-INTEL:~$ python3
Python 3.8.13 (default, Mar 28 2022, 11:38:47)
[GCC 7.5.0] :: Anaconda, Inc. on linux
Type "help", "copyright", "credits" or "license" for more information.
>>> import k2
>>> s = '''
File "<stdin>", line 1
s = '''
^
IndentationError: unexpected indent
>>> s = '''
... 0 1 -1 0.1
... 1
... '''
>>> fsa = k2.Fsa.from_str(s)
>>> fsa.draw('hello.svg', title='hello')
Traceback (most recent call last):
File "/home/np/anaconda3/lib/python3.8/site-packages/graphviz/backend/execute.py", line 81, in run_check
proc = subprocess.run(cmd, **kwargs)
File "/home/np/anaconda3/lib/python3.8/subprocess.py", line 493, in run
with Popen(*popenargs, **kwargs) as process:
File "/home/np/anaconda3/lib/python3.8/subprocess.py", line 858, in __init__
self._execute_child(args, executable, preexec_fn, close_fds,
File "/home/np/anaconda3/lib/python3.8/subprocess.py", line 1704, in _execute_child
raise child_exception_type(errno_num, err_msg, err_filename)
FileNotFoundError: [Errno 2] No such file or directory: PosixPath('dot')
The above exception was the direct cause of the following exception:
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/home/np/anaconda3/lib/python3.8/site-packages/k2/fsa.py", line 363, in draw
temp_fn = digraph.render(filename='temp',
File "/home/np/anaconda3/lib/python3.8/site-packages/graphviz/_tools.py", line 171, in wrapper
return func(*args, **kwargs)
File "/home/np/anaconda3/lib/python3.8/site-packages/graphviz/rendering.py", line 122, in render
rendered = self._render(*args, **kwargs)
File "/home/np/anaconda3/lib/python3.8/site-packages/graphviz/_tools.py", line 171, in wrapper
return func(*args, **kwargs)
File "/home/np/anaconda3/lib/python3.8/site-packages/graphviz/backend/rendering.py", line 324, in render
execute.run_check(cmd,
File "/home/np/anaconda3/lib/python3.8/site-packages/graphviz/backend/execute.py", line 84, in run_check
raise ExecutableNotFound(cmd) from e
graphviz.backend.execute.ExecutableNotFound: failed to execute PosixPath('dot'), make sure the Graphviz executables are on your systems' PATH
>>>
>>>
Ask questions at: https://github.com/npovey/speech/discussions